Quality Stats

Generates a table containing the most important quality metrics from a sequencing summary: number of all reads, number of passed reads, N50 value, mean Q-score, longest read length, and mean length of passed reads.

Usage

quality_stats(seq_summary)

Arguments

seq_summary

A dataframe containing the sequencing summary

Value

A dataframe with quality metrics for the sequencing run

Examples

if (FALSE) { # \dontrun{
quality_stats(sample_data)
} # }