Process and split Dorado summary file into smaller parts

Splits a Dorado summary file or data frame (in-memory file) into multiple smaller files for downstream analysis. This helps to avoid memory overflow and data loss during processing.

Usage

process_dorado_summary(dorado_summary, save_dir, part_size, cli_log)

Arguments

dorado_summary

Character path to Dorado summary file, or a data frame containing summary information.

save_dir

Character path to directory where split summary files will be saved.

part_size

Integer. Number of reads per file part when splitting the summary file.

cli_log

Function for logging messages and progress.

Value

Character vector containing paths to the split summary files.

Examples

if (FALSE) { # \dontrun{
summary_files <- process_dorado_summary(
  dorado_summary = "path/to/summary.txt",
  save_dir = "path/to/output/",
  part_size = 40000,
  cli_log = message
)
} # }